Info: processing `PHP': Please wait... Info: processing `PHP': Please wait... Info: processing `PHP': Please wait... Info: processing `PHP': Please wait......it's likely that Code Intel wasn't compiled properly when you installed it using Package Control. The reason for this is that there's a build script that's fired off after you install the plugin and if for whatever reason, you don't have the required pre-requisite packages required to build it on your machine, you'll be left with a broken installation. To fix this (at least on Ubuntu, it's likely to be the same on Debian for e.g), run the following command to install the missing required packages before reinstalling SublimeCodeIntel.
sudo apt-get install python-dev libpcre3-dev build-essentialNow simply reinstall SublimeCodeIntel and you should find the plugin now springs into action! Enjoy :)